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Stanley Qi Lab

Synthetic Biology | Genome Engineering | Gene and Cell Therapy

Which cell type do you want to target specifically?

* If you are unsure, check the "Available Cells for Seach" list.

Advanced Parameters

Choose between modes to view markers generated using different aggregation methods.

In Median mode, marker genes are identified based on the median expression of each gene across all clusters belonging to a cell type.
In Max mode, marker genes are determined using the highest expression observed among clusters of a given cell type.
Both approaches can reveal useful insights depending on whether you prioritize robust, consensus markers (Median) or cluster-specific, peak expression markers (Max).

* Click the off target diagram to view top nine off - target cells

Available cells for search

double click on cell name for auto-fill

Contact

Luna L.

ll.maintaince@gmail.com

Xinyi C.

xinyic001@gmail.com

References

Previously published data sources were used in the analysis of cell surface markers; no raw data is redistributed through this website:

RNA single cell type data and RNA single cell type tissue cluster data from the Human Protein Atlas (HPA) v23.0 – https://v23.proteinatlas.org (Thul et al., Science, 2017)
Cell surface protein atlas from Cell Surface Protein Atlas (CSPA) (Bausch-Fluck et al., PLoS ONE, 2015)
Cell markers from PanglaoDB (Franzén et al., Database, 2019)
Cell markers from CellMarker 2.0 (Hu et al., Nucleic Acids Research, 2023)

Citation:

Chen, X., Situ, Y., Yang, Y., Lyu, L., Han, M., Magni, L., Fu, M. L., Deng, B., Wang, S. & Qi, L. S. Programmable macromolecule delivery via engineered trogocytosis. Accepted in principle, Nature Cell Biology (2026).